Overlay Canvas

The OverlayCanvas component is a simple component that displays several spectra overlaid in the same domain. This component is useful for showing similarities between spectra.

The OverlayCanvas constructor takes the HTML element name, width and height as parameters. To add spectra, just use the OverlayCanvas.addSpectrum() function. The OverlayCanvas class is a child of the SpectrumCanvas class, which in turn, is a child of the Canvas class.

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new ChemDoodle.OverlayCanvas(name, width, height);

Examples

Comparing the experimental proton NMR spectrum of 2-methyl-1-propanol with a simulation from ChemDoodle desktop:

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<script>
  var overlayNMR = new ChemDoodle.OverlayCanvas('overlayNMR', 500, 200);
  overlayNMR.specs.plots_showYAxis = true;
  overlayNMR.specs.plots_showGrid = true;
  overlayNMR.specs.plots_flipXAxis = true;
  // set the experimental spectrum plot to red
  overlayNMR.specs.plots_color = 'red';
  // add the first spectrum
  overlayNMR.addSpectrum(ChemDoodle.readJCAMP('##TITLE= 2-methyl-1-propanol\n##JCAMP-DX= 5.00 $$From Command Line Converter 1.0\n##DATA TYPE= NMR Spectrum\n##DATA CLASS=  XYDATA\n\n##ORIGIN= Exported from Command Line Converter 1.0\n##OWNER= SVB\n##$URL= http://wwwchem.uwimona.edu.jm:1104/software/jcampdx.html\n##SPECTROMETER/DATA SYSTEM= NUTS EXPORT\n##.OBSERVE FREQUENCY= 300.149506\n##.OBSERVE NUCLEUS= ^1H\n##INSTRUMENTAL PARAMETERS= 1H\n##XUNITS= PPM\n##YUNITS= ARBITRARY UNITS\n##XFACTOR= 0.0000035013\n##YFACTOR= 3.5404570000\n##FIRSTX=   0.449892\n##FIRSTY= 9201.000000\n##LASTX=   3.951200\n##NPOINTS= 2153\n##MAXY= 3534337.000000\n##MINY= -6120.000000\n##DELTAX=   0.001627\n##XYDATA= 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  var spec2 = ChemDoodle.readJCAMP('##TITLE=\n##JCAMP-DX=4.24 $$ChemDoodle v5.0.0\n##ORIGIN=null\n##OWNER=UNKNOWN\n##DATE=12/05/04\n##TIME=10:51:04\n##NPOINTS=6508\n##FIRSTX=-5.0\n##LASTX=15.0\n##FIRSTY=0.0\n##XUNITS=PPM\n##YUNITS=\n##XFACTOR=1.0\n##DELTAX=9.999983E-5\n##YFACTOR=4.656613E-10\n##XYDATA= 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  // create a new VisualSpecifications object for the simulated spectrum
  spec2.specs = new ChemDoodle.structures.VisualSpecifications();
  // set the simulated spectrum color to blue
  spec2.specs.plots_color = 'blue';
  spec2.specs.plots_flipXAxis = true;
  overlayNMR.addSpectrum(spec2);
  // repaint since we never called a loadSpectrum() function
  overlayNMR.repaint();
</script>